Advances in single-cell sequencing: insights from organ transplantation

Table 3 Tools for scRNA-seq trajectory inference

Method	URL	References
Monocle	http://cole-trapnell-lab.github.io/monocle-release/	[66]
Monocle2	http://cole-trapnell-lab.github.io/monocle-release/	[67]
TSCAN	https://github.com/zji90/TSCAN	[68]
Wishbone	https://github.com/ManuSetty/wishbone	[69]
Slingshot	https://github.com/kstreet13/slingshot	[70]
Diffusion Pseudotime Software	https://static-content.springer.com/esm/art%3A10.1038%2Fnmeth.3971/MediaObjects/41592_2016_BFnmeth3971_MOESM375_ESM.zip	[71]
Wanderlust	https://github.com/wanderlust/wanderlust	[72]

ISSN: 2054-9369